Welcome to TransClust
What is TransClust?
A feature-rich clustering tool for biomedical data sets
TransClust is a comprehensive clustering tool that incorporates the hidden transitive nature occuring e.g. within biomedical data sets. It is based on Weighted Transitive Graph Projection problem.
Core Developers
Mainly Developed in the Computational Systems Biology group
Core Features at a Glance
TransClust supports the user from pre-processing to post-processing
TransClust is maybe one of the feature-richest clustering tools available. Here are just some of the many highlights of TransClust:
- TransClust can handle missing values
- TransClust is freely available as a Java Program
- You don't want to install any software? Then try the online clutering solutions on this website.
- TransClust is also included into Cytoscape as a plug-in
- TransClust also can perform hierarchical clusterings
- TransClust provides the user with many pre- and post-processing features:
- Creating Costmatrizes from BLAST and FASTA files
- Parameter training using a gold standards
- Immediately provides numerous graphs for analyzing the output as well as the input data
Citation
More papers can be found when you browse to "Cite TransClust"
Wittkop T, Emig D, Lange SJ, Rahmann S, Albrecht M, Morris JH, Böcker S, Stoye J, Baumbach J (2010) Partitioning biological data with Transitivity Clustering. Nature Methods 2010 Jun;7(6):419-20. PubMed